PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT16363
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family WRKY
Protein Properties Length: 476aa    MW: 51834 Da    PI: 8.5555
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT16363genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY93.12.1e-29238297159
               ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
      WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
               ++Dg++WrKYGqK  kg+++pr+YYrCt a gCpv+k+v+r++ed +++++tYeg Hnh+
  EMT16363 238 MNDGCQWRKYGQKISKGNPCPRAYYRCTIAtGCPVRKQVQRCKEDMSILITTYEGAHNHH 297
               58***************************99****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.2E-31224297IPR003657WRKY domain
SuperFamilySSF1182903.27E-26231298IPR003657WRKY domain
PROSITE profilePS5081127.577233299IPR003657WRKY domain
SMARTSM007743.2E-35238298IPR003657WRKY domain
PfamPF031061.3E-25239297IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 476 aa     Download sequence    Send to blast
MIKGDQSQLG GHEERLKDQI RDDHRASDHN FFKFLQNQSS TKKEDQEDKI ASTRAEMGEV  60
RKENERLKMM LSRMVEDHRS LQKQLDALHQ QGRGKNLAVG SAAHTSPSNN VKEPGFVSLR  120
LGMSAGTSRQ NMGEKIKRGT NNPEGRDMSL ELSPGCKAVG AAGQSETKVR RDVLMLSPGG  180
SSEEEAVETT TTSAAASKMV KNPRSTGSGV ETEDEVAQQP LPKKARVSVR ARCDTPTMND  240
GCQWRKYGQK ISKGNPCPRA YYRCTIATGC PVRKQVQRCK EDMSILITTY EGAHNHHLSA  300
SATAMASTTS AAVSMLMSGS STSLGFPSTA SSLHDLRFGL PTATIVNPSN QLTGQPFFLP  360
VAGDASISAT PSYSTITLDL TSQATSQHAF SLSNSNRFSS SFIDSHGHNN NTSRVLAGAS  420
VTVVFNGSHP ERFSKWQDEV GAVVATVKLH KCYCFDISHI KSMEHINWLD EGYELC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A5e-202383001778Probable WRKY transcription factor 4
2lex_A5e-202383001778Probable WRKY transcription factor 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015693830.11e-117PREDICTED: probable WRKY transcription factor 72
TrEMBLN1R3K50.0N1R3K5_AEGTA; Putative WRKY transcription factor 72
STRINGMLOC_60283.10.0(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP50473862
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15130.13e-46WRKY DNA-binding protein 72